incidence2: Compute, Handle and Plot Incidence of Dated Events

Provides functions and classes to compute, handle and visualise incidence from dated events for a defined time interval. Dates can be provided in various standard formats. The class 'incidence2' is used to store computed incidence and can be easily manipulated, subsetted, and plotted. This package is part of the RECON (<>) toolkit for outbreak analysis (<>).

Version: 2.3.1
Depends: grates (≥ 1.0.0), R (≥ 4.1.0)
Imports: grDevices, data.table, pillar, utils, stats, tibble, tidyr, dplyr (≥ 1.1.0), tidyselect, rlang, vctrs
Suggests: outbreaks, ggplot2, scales, knitr, markdown, testthat (≥ 3.0.0)
Published: 2024-05-31
DOI: 10.32614/CRAN.package.incidence2
Author: Tim Taylor ORCID iD [aut, cre], Thibaut Jombart [ctb]
Maintainer: Tim Taylor <tim.taylor at>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README NEWS
In views: Epidemiology
CRAN checks: incidence2 results


Reference manual: incidence2.pdf
Vignettes: An introduction to incidence2


Package source: incidence2_2.3.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): incidence2_2.3.1.tgz, r-oldrel (arm64): incidence2_2.3.1.tgz, r-release (x86_64): incidence2_2.3.1.tgz, r-oldrel (x86_64): incidence2_2.3.1.tgz
Old sources: incidence2 archive

Reverse dependencies:

Reverse depends: i2extras
Reverse suggests: cfr


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